Parallel Stochastic Discrete Event Simulation of Calcium Dynamics in Neuron
نویسندگان
چکیده
منابع مشابه
Parallel Discrete Event Simulation
In simulating applications for execution on specific computing systems, the simulation performance figures must be known in a short period of time. One basic approach to the problem of reducing the required simulation time is the exploitation of parallelism. However, in parallelizing the simulation new problems arise. Due to the distributed generation of events causality errors can occur, as a ...
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Parallel discrete-event simulation (PDES), simply referred to as parallel simulation, is concerned with the execution of discrete-event simulation on parallel computers. PDES has been recognized as a challenging research field bridging between modeling and simulation, and high-performance computing. By exploiting the potential parallelism in a simulation model, PDES can overcome the limitations...
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The response of many types of integrate and fire cells to synaptic input can be computed analytically and their threshold crossing either computed analytically or approximated to high accuracy via Newton approximation. The NEURON simulation environment simulates networks of such artificial spiking neurons using discrete event simulation techniques in which computations are performed only when e...
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This paper describes a software enviroment devised to support parallel and sequential discrete-event simulation. It provides assistance to the user in issues such as selection of the synchronization protocol to be used in the execution of the simulation model. The software framework has been built upon the bulk-synchronous model of parallel computing. The well-defined structure of this model al...
متن کاملAsynchronous parallel discrete event simulation
AbstructComplex models may have model components distributed over a network and generally require significant execution times. The field of parallel and distributed simulation has grown over the past fifteen years to accommodate the need of simulation the complex models using a distributed versus sequential method. In particular, asynchronous parallel discrete event simulation (PDES) has been w...
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ژورنال
عنوان ژورنال: IEEE/ACM Transactions on Computational Biology and Bioinformatics
سال: 2019
ISSN: 1545-5963,1557-9964,2374-0043
DOI: 10.1109/tcbb.2017.2756930